YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1232059
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHILLFIFT VLLSLPSYGS VVIMGTRVIY PAEQKSINVR LNNGDSTPSL IQAWLDTGDP  60
   61 SSPPDSVRVP FIITPPVFRM EPLSGQTMRI MYTGEKLPAD RESLFWLNVL DIPAKPSFAG 120
  121 KSEKAQGYNY LQFAVRSRIK FFFRPDGLPF SPDDAYKKVT WQLTGGDTLQ ASNPTPYFIT 180
  181 FSTVSVGQGA QKVSSTQGGM AAPFSSVTFR LKQKVSPSGK VEWTVVNDNG GYQKGESVLK 240
  241

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	240	0.99