YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|506672
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLLLLSGALA LTQTWAGSHS MRYFYTSVSR PGRGEPRFIA VGYVDDTQFV RFDSDAASQR  60
   61 MEPRAPWIEQ EGPEYWDQET RNMKASAQTD RANLGTLRGY YNQSEDGSHT IQIMYGCDVG 120
  121 SDGRFLRGYR QDAYDGKDYI ALNEDLRSWT AADMAAQITK RKWEAAHAAE QRRAYLEGTC 180
  181 VDGLRRYLEN GKETLQRTDP PKTHMTHHPI SDHEATLRCW ALGFYPAEIT LTWQRDGEDQ 240
  241 TQDTELVETR PADGTFQKWA AVVVPSGEEQ RYTCHVQHEG LPKPLTLRWE PSSQPTIPIV 300
  301 GIIAGLVLLG AVITGAVVAA VMWRRKSSDR KGGSYTQAAS SDSAQGSDVS LTACKV

Type	Start	End	Confidence
Non-Cytoplasmic	1	298	0.98
Transmembrane Helix	299	321	0.95
Cytoplasmic	322	356	0.96