YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|506662
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLLLLSGTLA LTQTWAGSHS MRYFFTSVSR PGRGEPRFIA VGYVDDTQFV RFDSDAASQR  60
   61 MEPRAPWIEQ EGPEYWDQET RSVKAQAQTD RVDLGTLRGY YNQSEDGSHT IQIMYGCDVG 120
  121 SDGRFLRGYR QDAYDGKDYI ALNEDLRSWT AADMAAQITQ RKWEAAHEAE QWRAYLEGLC 180
  181 VEWLRRYLEN GKETLQRTDP PKTHMTHHPI SDHEATLRCW ALGFYPAEIT LTWQRDGEDQ 240
  241 TQDTELVETR PAGDGTFQKW AAVVVPSGEE QRYTCHVQHE GLPKPLTLRW EPSSQPTIPI 300
  301 VGIIAGLVLL GAVITGAVVA AVMWRRKSSD RKGGSYTQAA SSDSAQGSDV SLTACKV

Type	Start	End	Confidence
Non-Cytoplasmic	1	299	0.99
Transmembrane Helix	300	322	0.95
Cytoplasmic	323	357	0.96