YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|841160
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAPTVYPVL LFLWFTGAIC DIQMTQSPSS LPASLGDRVT INCQASQDIS NYLNWYQQKP  60
   61 GKAPKLLIYY TNKLADGVPS RFSGSGSGRD SSFTISSLES EDIGSYYCQQ YYNYPWTFGP 120
  121 GTKLEIKRAD AKPTVSIFPP SSEQLGTGSA TLVCFVNNFY PKDINVKWKV DGSEKRDGVL 180
  181 QSVTDQDSKD STYSLSSTLS LTKADYERHN LYTCEVTHKT STAAIVKTLN RNEC

Type	Start	End	Confidence
Signal Peptide	1	20	0.92
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	234	0.99