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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149037676, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSGCPPSL PLCVCLFLAS GFAQAGRLLV VPMDGSHWFT MQMIVEKLSH RGHEVVVVIP  60
   61 EVSWHMGKSL NFTVKTYSVS YTLEDLNYHF KFFAHNQWKT QEVGMFSLLK HSGKGFFELL 120
  121 FSHCRSLFKD KKLVEYLKQS SFDAVFLDPF DVCGLILAKY FSLPSVVFSG GIFCHYLDEG 180
  181 AQCPSPPSYV PRILSKFTDT MTFKERVWNH LSYMKERAFC PYFFKTAVEI ASEVLQTPVT 240
  241 MRDLFSPVSI WMFRTDFVLE FPRPVMPNMV YIGGINCHQG KPLSKEFEAY VNASGEHGIV 300
  301 VFSLGSMVSE IPEKKAMEIA EALGRIPQTV LWRYTGTRPS NLAKNTILVK WLPQNDLLGH 360
  361 PKARAFITHS GSHGIYEGIC NGVPMVMMPL FGDQMDNAKR METRGAGVTL NVLEMTADDL 420
  421 ENALKTVINN KSYKENIMRL SSLHKDRPIE PLDLAVFWVE YVMRHKGAPH LRPAAHDLTW 480
  481 YQYHSLDVIG FLLAIVLTVV FIVYKSCAYG CRKCFGGKGR VKKSHKSKTH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle