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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89276776, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLHVTLQGL AGLLLLLYAL PWAEGGKVLV FPMEGSHWLS MRDVVRELHA RGHQAVVLAP  60
   61 EVTVHIKEED FFTLQTYPVP YTRQGFRQQM MRNIKVVFET GNYVKTFLET SEILKNISTV 120
  121 LLRSCMNLLH NGSLLQHLNS SSFDMVLTDP VIPCGAVLAK YLGIPTVFFL RYIPCGIDSE 180
  181 ATQCPKPSSY IPNLLTMLSD HMTFLQRVKN MLYPLALKYI CHFSFTRYES LASELLQREV 240
  241 SLVEVLSHAS VWLFRGDFVF DYPRPVMPNM VFIGGINCVI KKPLSQEFEA YVNASGEHGI 300
  301 VVFSLGSMVS EIPEKKAMEI AEALGRIPQT VLWRYTGTRP SNLAKNTILV KWLPQNDLLG 360
  361 HPKARAFITH SGSHGIYEGI CNGVPMVMMP LFGDQMDNAK RMETRGAGVT LNVLEMTADD 420
  421 LENALKTVIN NKSYKENIMR LSSLHKDRPI EPLDLAVFWV EYVMRHKGAP HLRPAAHDLT 480
  481 WYQYHSLDVI GFLLAIVLTV VFIVYKSCAY GCRKCFGGKG RVKKSHKSKT H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle