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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40849840, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIQGFLQKL SGLLLLLCAL PWAEGGKVLV FPMEGSHWLS MRDVVRELHA RGHQAVVLAP  60
   61 EVTVHIKEED FFTLQTYPVP YTKEEYRHHL LGHLQNFFET EFSLKLVLQR MAAVNNVSTF 120
  121 YVRSCRGLLH NTALIQSLNS SSFDVVLTDP FFPCGAVLAM YLRVPAVFFL QSMLCELEFE 180
  181 ATNSPNPSSY IPRLLTLNSD HMSFLDRVKN MLYPVPWMYL CHVNYGSLAR LASDLLQREV 240
  241 SVVEILRHAS VWLLRKDFVF YYPRPFMPNM VFIGGINCAN RKPLSQEFEA YVNASGEHGI 300
  301 VVFSLGSMVS EIPEKKAMEI AEALGRIPQT VLWRYTGTRP SNLAKNTILV KWLPQNDLLG 360
  361 HPKARAFITH SGSHGIYEGI CNGVPMVMMP LFGDQMDNAK RMETRGAGVT LNVLEMTADD 420
  421 LENALKTVIN NKSYKENIMR LSSLHKDRPI EPLDLAVFWV EYVMRHKGAP HLRPAAHDLT 480
  481 WYQYHSLDVI GFLLAIVLTV VFIVYKSCAY GCRKCFGGKG RVKKSHKSKT H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle