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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MMP11_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARAACLLRA ISRALLLPLP LLLLLLLLLP PQLMARARPP ENHRHRPVKR VPQLLPAALP  60
   61 NSLPSVPASH WVPGPASSSR PLRCGVPDPP DVLNARNRQK RFVLSGGRWE KTDLTYRILR 120
  121 FPWQLVREQV RQTVAEALRV WSEVTPLTFT EVHEGRADIM IDFTRYWHGD NLPFDGPGGI 180
  181 LAHAFFPKTH REGDVHFDYD ETWTIGDKGT DLLQVAAHEF GHVLGLQHTT AAKALMSPFY 240
  241 TFRYPLSLSP DDRRGIQHLY GRPQLTPTSP TPTLSSQAGT DTNEIALQEP EVPPEVCETS 300
  301 FDAVSTIRGE LFFFKAGFVW RLRSGQLQPG YPALASRHWQ GLPSPVDAAF EDAQGQIWFF 360
  361 QGAQYWVYDG EKPVLGPAPL SKLGLQGSPV HAALVWGPEK NKIYFFRGGD YWRFHPRTQR 420
  421 VDNPVPRRTT DWRGVPSEID AAFQDAEGYA YFLRGHLYWK FDPVKVKVLE SFPRPIGPDF 480
  481 FDCAEPANTF R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle