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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15042709
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFFGLTAE HDRVVPVRCV LKPFTVLVLL ALVGTHVAYA EEEIEFNTDV LDVQDRSRID  60
   61 LKEFSRAGYI MPGDYQMMIR LNKSELSEMP VTFMAPPDDP KGSVACLPPD MVKQLGLRAE 120
  121 WESKISWWNN NQCLEIKTLP GMMVRGDLGS DTLYLSVPQA YLEYSSSDWD PPSRWDEGIL 180
  181 GMMFDYNVNA QVSKPTKGNE NHNISANGTT GINFGAWRLR ADWQSQYNHT TGRAGSTERN 240
  241 WDWSRYYMYR AIPHWQAKLT LGEDYLNSGI FDSFRFTGAS LVTDDNMLPP NLRGYAPEVT 300
  301 GVAKTNARVT IRQQGRVLYE TQVAPGPFRI QDINDAVSGK LDVRVEEQDG GIQEFQVDTA 360
  361 SIPYLTRPGR VQYKLAAGKP TNWKHHSEGN GFGLGEFSWG INNGWSLYGG LLGAGDYNAL 420
  421 SLGVGRDLMA FGALSFDVTE SRARLPDEGK TLTGGSYRLS YSKRFEEYDS QVTFAGYRFS 480
  481 ERDFMSMSQY LDRRYHDGDA ESSKELYTIM LNKQFTDLGI STYLNYSHQT YWNQSNNDRY 540
  541 NISVSRYFAI GTIKNINLNL SAYRNKYEGK NDDGMYLTLS LPWGNSGTIS YNAMVNRKGN 600
  601 SNTVGYYDRI NENSSYRLAA GTSIDGKAAA NGYLTHYGDL AQLTTSASYQ DGRYTSAALA 660
  661 VQGGMTITPE GAALHRINTP GTTRLMVDTD GVGSVPVKGF GAITHTNMFG KAVISDVNNY 720
  721 YRNSASIDLN KLPDNVEAIR SVQQATLTEG AIGYRKFQVI SGEKAMSMIR LSDGSTPPFG 780
  781 ATVLNKDKRE IGIVNDGGNT YLSGINPGEK LDVRWDGELQ CVIELPHELP IVEEMASLLL 840
  841 PCQLVNGNKQ P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle