YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7435459, gi\|9...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIQYSSNWS CNLSMMARLA LCLLVMLSNN ASSSSARLLF NRTRGGFTIM PKEVHRRNLL  60
   61 DNGLGHTPPM GWNSWNHFAC NIKEDLIRET ADAMVSTGLA ALGYQYINID DCWGELNRDS 120
  121 KGNLVPKAST FPSGMKALAD YVHKNGLKLG IYSDAGNQTC SKTMPGSLGH EEQDAKTFAS 180
  181 WGIDYLKYDN CENNNISPKE RYPPMSEALA NTGRPIFFSL CEWGSEDPAT WAKSVGNSWR 240
  241 TTGDIQDKWD SMISRADLND KWASYAGPGG WNDPDMLEVG NGGMTTEEYR AHFSIWSLAK 300
  301 APLLIGCDIR ALDATTKELL SNKEVIAVNQ DKLGVQGKKV KSTNDLEVWA GPLSNNKVAV 360
  361 ILWNRSSSKA KVTASWSDIG LKPGTSVEAR DLWAHSTQSS VSGEISAELD SHACKMYVVT 420
  421 PN

Type	Start	End	Confidence
Signal Peptide	1	35	0.97
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	422	0.99