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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12643222
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRHLNTCYR LVWNHITGAF VVASELARAQ GKRGGVAVAL SLAAVTSLPV LAADIVVHPG  60
   61 ETVNGGTLVN HDNQFVSGTA DGVTVSTGLS LGPDSDENTG GQWIKAGGTG RNTTVTANGR 120
  121 QIVQAGGTAS DTVIRDGGGQ SLNGLAVNTT LDNRGEQWVH GGGKAAGTII NQDGYQTIKH 180
  181 GGLATGTIVN TGAEGGPESE NVSSGQMVGG TAESTTINKN GRQVIWSSGM ARDTLIYAGG 240
  241 DQTVHGEAHN TRLEGGNQYV HNGGTATETL INRDGWQVIK EGGTAAHTTI NQKGKLQVNA 300
  301 GGKASDVTQN TGGALVTSTA ATVTGTNRLG AFSVVEGKAD NVVLENGGRL DVLTGHTATN 360
  361 TRVDDGGTLD VRNGGTATTV SMGNGGVLLA DSGAAVSGTR SDGKAFSIGG GQADALMLEK 420
  421 GSSFTLNAGD TATDTTVNGG LFTARGGTLA GTTTLNNGAI LTLSGKTVNN DTLTIREGDA 480
  481 LLQGGALTGN GSVEKSGSGT LTVSNTTLTQ KAVNLNEGTL TLNDSTVTTD VIAQRGTALK 540
  541 LTGSTVLNGA IDPTNVTLAS GATWNIPDNA TVQSVVDDLS HAGQIHFTST RTGKFVPATL 600
  601 KVKNLNGQNG TISLRVRPDM AQNNADRLVI DGGRATGKTI LNLVNAGNSA SGLATSGKGI 660
  661 QVVEAINGAT TEEGAFIQGN KLQAGAFNYS LNRDSDESWY LRSENAYRAE VPLYASMLTQ 720
  721 AMDYDRILAG SRSHQTGVSG ENNSVRLSIQ GGHLGHDNNG GIARGATPES SGSYGFVRLE 780
  781 GDLLRTEVAG MSVTAGVYGA AGHSSVDVKD DDGSRAGTVR DDAGSLGGYL NLIHNASGLW 840
  841 ADIVAQGTRH SMKASSDNND FRVRGWGWLG SLETGLPFSI TDNLMLEPQL QYTWQGLSLD 900
  901 DGQDNASYVK FGHGSAQHVR AGFRLGSHHD MNFGKGTSSR DTLRGSAKHS VRELPVNWWV 960
  961 QPSVIRTFSS RGDMSMGTAA AGSNMTFSPS QNGTSLDLQA GLEARVRENI TLGVQASYAH1020
 1021 SINGSSAEGY NSQATLNVTF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle