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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PLB5_SCHPO
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSSFGLFL ALQLLPALGL PSRIDEVDVS DPELIGLLKP DNVDKPANSI PLSKRSTSPS  60
   61 YAPYTVACPS GSLLRPASDG LSTGEQEFVD KRVSKVNSAL ESFISKTGLK IDTKSVLNDT 120
  121 DGPRLGIAIS GGGFPAMLTG AGAINAFDAR NGNTTSLGGI LQSSMYLTGL SGGSWLVGSV 180
  181 AVNNFANITF LHDDVWNLDH SLFAPYDDAF ENFYIYQEWF EQVLQKKNAG FNVSITDLWG 240
  241 RALALKLVNP LTGGANTTFS SVTNETWFQD GEFPFPIIIA DNVIEGETVI PLNDTVFEFT 300
  301 PIEFGTWDTG VESFIPMEYT GTHLINGIPL NESCVRNFDN AGFLMGTSSN VFSGILPATN 360
  361 ASLTASNNTF NNAVLSFLEM LAEDQLDVGL YPNPYQGYGN ASNTTTTNPL EPYPIIELID 420
  421 GGSDSEGIPF WPLLHPQRDV DVIFAIDGGY QSATSGWPDG SSLVSTYERV LATNSSGVRG 480
  481 FPYIPDTNTF LALGLNTHPT FFGCDGRNTT AGNHTVNDDT PPLVVYFPNY PWTMYANVTT 540
  541 YTVQLEDTLS SGMIENAAVA ATQNNSDSFA VCVACALVQR SLERKNMSTP SQCASCFNQY 600
  601 CWNGTIASTT VTTYAPTVLS AKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle