YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|693922
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTMALSS PSFAGQAVKL SPSASEISGN GRITMRKAVA KSAPSSSPWY GPDRVKYLGP  60
   61 FSGESPSYLT GEFPGDYGWD TAGLSADPET FAKNRELEVI HCRWAMLGAL GCVFPELLAR 120
  121 NGVKFGEVVW FKAGSQIFSE GGLDYLGNPS LVHAQSILAI WACQVVLMGA VEGYRIAGGP 180
  181 LGEVVDPLYP GGSFDPLGLA EDPEAFAELK VKEIKNGRLA MFSMFGFFVQ AIVTGKGPLE 240
  241 NLADHLADPV NNNAWSYATN FVPGK

Type	Start	End	Confidence
Signal Peptide	1	17	0.58
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	265	0.76