YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|147904463, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGAYGAGK AGGAFDPQTF IRQPHTILRM VSWVFSIVVF GCIINEGYIN SSTEEEEHCI  60
   61 FNRNPSACSY GVTVGVLAFL TCLLYLAVDI YFPQISSVKD RKKTVISDIA VSALWAFFWF 120
  121 VGFCFLANQW QVSNPNDNPM NEGADAARAA ITFSFFSIFT WAGQAVLAYQ QYRLGSDSAL 180
  181 FSQDYMDPSQ DQGPPYPPYA SNEDLDPSAG YQQPPTEAYD AGSHGYQTQD Y

Type	Start	End	Confidence
Cytoplasmic	1	29	0.91
Transmembrane Helix	30	49	0.90
Non-Cytoplasmic	50	69	0.89
Transmembrane Helix	70	92	0.88
Cytoplasmic	93	104	0.93
Transmembrane Helix	105	127	0.87
Non-Cytoplasmic	128	145	0.88
Transmembrane Helix	146	168	0.85
Cytoplasmic	169	231	0.95