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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9622880, gi|1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGDADGVKS GRRGGGQVCQ ICGDGVGTTA EGDVFAACDV CGFPVCRPCY EYERKDGTQA  60
   61 CPQCKTKYKR HKGSPAIRGE EGDDTDADSD FNYLASGNED QKQKIADRMR SWRMNVGGSG 120
  121 DVGRPKYDSG EIGLTKYDSG EIPRGYIPSV TNSQISGEIP GASPDHHMMS PTGNIGKRAP 180
  181 FPYVNHSPNP SREFSGSIGN VAWKERVDGW KMKQDKGTIP MTNGTSIAPS EGRGVGDIDA 240
  241 STDYNMEDAL LNDETRQPLS RKVPLPSSRI NPYRMVIVLR LIVLSIFLHY RITNPVRNAY 300
  301 PLWLLSVICE IWFALSWILD QFPKWFPINR ETYLDRLALR YDREGEPSQL AAVDIFVSTV 360
  361 DPMKEPPLVT ANTVLSILAV DYPVDKVSCY VSDDGAAMLT FDALAETSEF ARKWVPFVKK 420
  421 YNIEPRAPEW YFSQKIDYLK DKVHPSFVKD RRAMKREYEE FKVRVNGLVA KAQKVPEEGW 480
  481 IMQDGTPWPG NNTRDHPGMI QVFLGHSGGL DTEGNELPRL VYVSREKRPG FQHHKKAGAM 540
  541 NALVRVSAVL TNGQYMLNLD CDHYINNSKA LREAMCFLMD PNLGRSVCYV QFPQRFDGID 600
  601 RNDRYANRNT VFFDINLRGL DGIQGPVYVG TGCVFNRTAL YGYEPPIKQK KGGFLSSLCG 660
  661 GRKKASKSKK GSDKKKSQKH VDSSVPVFNL EDIEEGVEGA GFDDEKSLLM SQMSLEKRFG 720
  721 QSAAFVASTL MEYGGVPQSA TPESLLKEAI HVISCGYEDK TEWGTEIGWI YGSVTEDILT 780
  781 GFKMHARGWR SIYCMPKRPA FKGSAPINLS DRLNQVLRWA LGSVEILFSR HCPLWYGYGG 840
  841 RLKFLERFAY INTTIYPLTS IPLLIYCILP AICLLTGKFI IPEISNFASI WFISLFISIF 900
  901 ATGILEMRWS GVGIDEWWRN EQFWVIGGIS AHLFAVFQGL LKVLAGIDTN FTVTSKASDE 960
  961 DGDFAELYMF KWTTLLIPPT TILIINLVGV VAGISYAINS GYQSWGPLFG KLFFAFWVIV1020
 1021 HLYPFLKGLM GRQNRTPTIV VVWAILLASI FSLLWVRIDP FTTRVTGPDT QTCGINC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle