YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109730909, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSWRTSPSL KMIMNSAVSL VILLSLLCEA HTVVLLNPTD SSLPANNFTD TEAALSTPLE  60
   61 SADIPKARRK RYISQNDMIA ILDYHNQVRG KVFPPAANME YMVWDENLAK SAEAWAATCI 120
  121 WDHGPSYLLR FLGQNLSVRT GRYRSILQLV KPWYDEVKDY AFPYPQDCNP RCPMRCFGPM 180
  181 CTHYTQMVWA TSNRIGCAIH TCQNMNVWGS VWRRAVYLVC NYAPKGNWIG EAPYKVGVPC 240
  241 SSCPPSYGGA CTDNLCFPGV TTNYLYWFK

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	269	0.99