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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14349292
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYGRSDSYR VATTQDKDDK DSPKKKGTKD LDDLKKEVPL TEHKMSVEEV CRKFQTDIVQ  60
   61 GLTNAKAREF LARDGPNALT PPPTTPEWVK FCRQLFGGFS ILLWIGAILC FLAYAIQAAT 120
  121 EDEPAGDNLY LGIVLSAVVI ITGCFSYFQE AESSKIMESF KNMVPQQALV IREGEKMQIN 180
  181 AEEVVAGDLV EVKGGDRIPA DLRIVSSHGC KVDNSSLTGE SEPQTRSPDC THDNPLETRN 240
  241 IAFFSTNCVE GTARGIVVCT GDRTVMGRIA TLTSGLETGK TPIAKEIEHF IHIITGVAVF 300
  301 LGVSFFILSI ILGYTWLEAV IFLIGIIVAN VPEGLLATVT VCLTLTAKRM ARKNCLVKNL 360
  361 EAVETLGSTS TICSDKTGTL TQNRMTVAHM WFDNQIHEAD TTEDQSGASF DKSSATWVAL 420
  421 ARVAALCNRA VFKAQQDSLP ILKRDVAGDA SESALLKCIE LSCGSVKMMR EKNKKVAEIP 480
  481 FNSTNKYQLS VHETEDPNDN RYLLVMKGAP ERILDRCSTI MLQGKEQPMD EEMKEAFQNA 540
  541 YLELGGLGER VLGFCHLLLP EDQYPKGFAF DTEDVNFQTD NLCFVGLMSM IDPPRAAVPD 600
  601 AVGKCRSAGI KVIMVTGDHP ITAKAIAKGV GIISEGNETV EDIAARLNIP VSQVNPRDAK 660
  661 ACVIHGTDLK DYSQEQIDEV LRNHTEIVFA RTSPQQKLII VEGCQRQGAI VAVTGDGVND 720
  721 SPALKKADIG VAMGIAGSDV SKQAADMILL DDNFASIVTG VEEGRLIFDN LKKSIAYTLT 780
  781 SNIPEITPFL FFIIVNIPLP LGTITILCID LGTDMVPAIS LAYEAAESDI MKRQPRNPLR 840
  841 DKLVNERLIS IAYGQIGMIQ ALGGFFSYFV ILAENGFLPS LLVGIRLNWD DRSQNDLEDS 900
  901 YGQQWTYEQR KIVEFTCHTA FFVSIVVVQW ADVIICKTRR NSVFQQGMKN KILIFGLFEE 960
  961 TALAAFLSYC PGMDVALRMY PLKPSWWFCA FPYSFLIFVY DEVRKLLIRR NPGGWVEKET1020
 1021 YY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle