YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPPE1_MACFA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMIEVGFER QNFYPLKRKS ALLLKLIAVV FAVLLFCEFL IYYLAIFQCN WPEVKTTAYD  60
   61 GEQASHEPVL KAMFLADTHL LGEFLGHWLD KLRREWQMER ALQTALWLLQ PEVVFILGDV 120
  121 FDEGKWSTPE AWADDVERFQ KMFRHPSHVQ LKVVAGNHDI GFHYEMNTYK VERFEKVFSS 180
  181 ERLFSWKGIN FVMVNSVAMN GDGCGICSEA EAELIEVSHR LNCSREARGS RRCGPGPLLP 240
  241 VSAPVLLQHY PLYRRSDANC SGDDAAPPEE RDIPFKENYD VLSREASQKL LWWLQPRLVL 300
  301 SGHTHSACEV HHGGRVPEFS VPSFSWRNRN NPSFIMGSIT PTDYALSKCY LPREDVVLVI 360
  361 YCGAVGFLVV LTLSHLGLLA SPFLSGLNLL RKRKTR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.99
Transmembrane Helix	21	44	0.94
Non-Cytoplasmic	45	356	0.71
Transmembrane Helix	357	384	0.80
Cytoplasmic	385	396	0.59