YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9587115
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNYQEYKMD IINQGKCLCG QYIRARLRRA GVLNRKVTQR LRNILDPGSS HVVYEVFPAL  60
   61 NSMGEELERM HPRVYTNISR QLSRAPFGEL EDSDMAPMLL NLVAKDLFRS SITWGKIISI 120
  121 FAVCGGFAID RVRQGHFDYL QCLIDGLAEI IEDDLVYWLI DNGGWLGLSR HIRPRVGEFT 180
  181 FLGWLTLFVT ISAGAYMVSN VCRRIGGQLY SLLF

Type	Start	End	Confidence
Cytoplasmic	1	111	0.84
Transmembrane Helix	112	129	0.54
Non-Cytoplasmic	130	178	0.58
Transmembrane Helix	179	202	0.83
Cytoplasmic	203	214	0.54