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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88180
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVPFFSSLR CMVDLGPCWA GGLTAEMKLL LALAGLLAIL ATPQPSEGAA PAVLGEVDTS  60
   61 LVLSSMEEAK QLVDKAYKER RESSSMEEAK QLVDKAYKER RERWGTRHCP ALGKDVPGLS 120
  121 EKQQAAGSLK HQAAASQRLS QPHGTPILLQ AAGGSHQDGG EGRIKQRLRS GSASPMELLS 180
  181 YFKQPVAATR TAVRAADYLH VALDLLERKL RSLWRRPFNV TDVLTPAQLN VLSKSSGCAY 240
  241 QDVGVTCPEQ DKYRTITGMC NNRRSPTLGA SNRAFVRWLP AEYEDGFSLP YGWTPGVKRN 300
  301 GFPVALARAV SNEIVRFPTD QLTPDQERSL MFMQWGQLLD HDLDFTPEPA ARASFVTGVN 360
  361 CETSCVQQPP CFPLKIPPND PRIKNQADCI PFFRSCPACP GSNITIRNQI NALTSFVDAS 420
  421 MVYGSEEPLA RNLRNMSNQL GLLAVNQRFQ DNGRALLPFD NLHDDPCLLT NRSARIPCFL 480
  481 AGDTRSSEMP ELTSMHTLLL REHNRLATEL KSLNPRWDGE RLYQEARKIV GAMVQIITYR 540
  541 DYLPLVLGPT AMRKYLPTYR SYNDSVDPRI ANVFTNAFRY GHTLIQPFMF RLDNRYQPME 600
  601 PNPRVPLSRV FFASWRVVLE GGIDPILRGL MATPAKLNRQ NQIAVDEIRE RLFEQVMRIG 660
  661 LDLPALNMQR SRDHGLPGYN AWRRFCGLPQ PETVGQLGTV LRNLKLARKL MEQYGTPNNI 720
  721 DIWMGGVSEP LKRKGRVGPL LACIIGTQFR KLRDGDRFWW ENEGVFSMQQ RQALAQISLP 780
  781 RIICDNTGIT TVSKNNIFMS NSYPRDFVNC STLPALNLAS WREAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle