YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1838935
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGRNSAIAA GVCGALFIGY CIYFDRKRRS DPNFKDRLRE RRKKQKLAKE RAGLSKLPDL  60
   61 KDAEAVQKFF LEEIQLGEEL LAQGDYEKGV DHLTNAIAVC GQPQQLLQVL QQTLPPPVFQ 120
  121 MLLTKLPTIS QRIVSAQSLG EDDVE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.70
Transmembrane Helix	7	24	0.81
Cytoplasmic	25	145	0.72