YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3152652
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLANVLLTL LPVSLLATES LAGSSSHSAH ALPARRRHNK GRALSPIKAS NSSSEHETNR  60
   61 IASAGASADD FSPVTGRRVS KRAQCGVSSP ATSSKTSSTI TVGAAVVPTA AATSSSKWKL 120
  121 DLEAKGNSFF DTFNFWAYDD PTHGTVTYVS QDEATKSNLA TVNGKGNAVL AVDTTQNVQK 180
  181 GRKAVRLHSS YIFNGGLILA DIVHMPTGCG TWPAWWSNGP DWPNKGEIDI LEGTHSWDRN 240
  241 QVSVHTSDGC TIPSNYGASA VLTTGSFVNT NCASYATSNQ GCGQRESASH QAYGEPFNQN 300
  301 GGGVYAMKWD TSGISVYFFP RNAIPADITQ GVPLPETWGT PMGNFPSTSC EPFKFFKDHH 360
  361 TIINTTFCGD WANSDWWTAG SAGNGQSCAA KTGYNSCSDY VLNNGDKFHE AYWEFASVKY 420
  421 YQPK

Type	Start	End	Confidence
Signal Peptide	1	28	0.90
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	424	0.99