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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7209584
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISTVIFEI CLLWGQILST ASQTAVPTDE VSYTAEQSTE GTDSGLAVRL VNGGDRCQGR  60
   61 VEILYQGSWG TVCDDSWDLN DANVVCRQLG CGLAVSAPGN ARFGQGSGPI VMDDVACGGY 120
  121 EDYLWRCSHR GWLSHNCGHQ EDAGVICSDS QTSSPTPGWW NPGGTNNDVF YPTEQTTAEQ 180
  181 TTIPDYTPIG TDSGLAVRLV NGGDRCQGRV EILYQGSWGT VCDDSWDVSD ANVVCRQLGC 240
  241 GWAVSAPGNA YFGQGQGPIV LDDVACGGYE NYLWSCSHQG WLSHNCGHQE DAGVICSASQ 300
  301 SSSPTPGWWN PGGTNNDVFY PTEQTTAGTD SGLAVRLVNG GDRCQGRVEI LYQGSWGTVC 360
  361 DDSWDTNDAN VVCRQLGCGW AVSAPGNAYF GPGSGSIVLD DVACTGHEDY LWRCSHRGWL 420
  421 SHNCGHHEDA GVICSASQSS SPTPDVFYPT DQTTAEQTTV PDYTPIGTDS GLAVRLVNGG 480
  481 DRCQGRVEIL YQGSWGTVCD DSWDLNDANV VCRQLGCGLA VSAPGSARFG QGTGPIVMDD 540
  541 VACGGYEDYL WRCSHRGWLS HNCGHHEDAG VICSASQSSS PTPDVFYPTD QTTAEQTTVP 600
  601 DYTTIGTENS LAVRLENGGD RCQGRVEILY QGSWGTVCDD SWDLNDANVV CRQLGCGLAV 660
  661 SAPGSARFGQ GTGPIVMDDV ACGGYEDYLW RCSHRGWLSH NCGHHEDAGV ICSASQSSSP 720
  721 TPDVFYPTDQ TTVEQTTVPD YTPIGTENSL AVRLENGGDR CQGRVEILYQ GSWGTVCDDS 780
  781 WDTKDANVVC RQLGCGWAVS APGNAYFGPG SGSIVLDDVA CTGHEDYLWS CSHRGWLSHN 840
  841 CGHHEDAGVI CSDAQIQSTT RPDLWPTTTT PETTTELLTT TPYFDWWTTT SDYSCGGLLT 900
  901 QPSGQFSSPY YPSNYPNNAR CSWKIVLPNM NRVTVVFTDV QLEGGCNYDY ILVYDGPEYN 960
  961 SSLIARVCDG SNGSFTSTGN FMSVVFITDG SVTRRGFQAH YYSTVSTNYS CGGLLTQPSG1020
 1021 QFSSPYYPSN YPNNARCSWE ILVPNMNRVT VVFTDVQLEG GCNYDYILVY DGPQYNSSLI1080
 1081 ARVCDGSNGS FTSTGNFMSV VFITDGSVTR RGFQAHYYST VSTTPPVPIP TTDDYSCGGL1140
 1141 LTLPSGQFSS PHYPSNYPNN ARCSWEILVP NMNRVTVAFT DVQLEGGCNY DYILVYDGPE1200
 1201 YNSSLIARVC DGSNGSFTST GNFMSVVFIT DGSVTRRGFQ AHYYSTVSTN YSCGGLLTQP1260
 1261 SGQFSSPHYP SNYPNNVRCS WEILVPSMNR VTVAFTDVQL EGGCSFDYIL VYDGPEYNSS1320
 1321 LIAPVCDGFN GSFTSTGNFM SVVFITDGSV TRRGFQAYYY STVSTSPPSF PNITGNDSSL1380
 1381 ALRLVNGSNR CEGRVEILYR GSWGTVCDDS WGISDANVVC RQLGCGSALS APGNAWFGQG1440
 1441 SGLIVLDDVS CSGYESHLWN CHHPGWLVHN CRHSEDAGVI CALPEVTSPS PGWWTTSPSY1500
 1501 VNYTCGGFLT QPSGQFSSPF YPGNYPNNAR CLWNIEVPNN YRVTVVFRDL QLERGCSYDY1560
 1561 IEIFDGPHHS SPLIARVCDG SLGSFTSTSN FMSIRFITDH SITARGFQAH YYSDFDNNTT1620
 1621 NLLCQSNHMQ ASVSRSYLQS MGYSARDLVI PGWNSSYHCQ PQITQREVIF TIPYTGCGTI1680
 1681 KQADNETINY SNFLRAVVSN GIIKRRKDLN IHVSCKMLQN TWVNTMYITN NTVEIQEVQY1740
 1741 GNFDVNISFY TSSSFLFPVT SSPYYVDLDQ NLYLQAEILH SDASLALFVD TCVASPHPND1800
 1801 FSSLTYDLIR SGCVRDDTYQ SYSSPSPRVS RFKFSSFHFL NRFPSVYLQC KLVVCRAYDT1860
 1861 SSRCYRGCVV RSKRDVGSYQ EKVDVVLGPI QLQSPSKEKR SLDLAVEDVK KPASSQAVYP1920
 1921 TAAIFGGVFL AMGLAVAAFT LGRRTHIDRG QPPSTKL

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