YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12060331, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGYTFMMS IAQVRSAGSA AGYYSDRDNY YVLGSLEERW AGKGADELGL QGAVDKEVFT  60
   61 RVLEGRLPDG ADLSRQQDGG NKHRPGYDLT FSAPKSVSLM AMLAGDKRLT EAHNQAVDIA 120
  121 VRQVEALAST RVMTDGQSET VLTGNLVMAL FNHDTSRDQE PQLHTHAVVA NVTQHDGEWK 180
  181 TLSSDKVGKT GFIENVYANQ IAFGKIYRAV LKEKVEALGY ETEVVGKHGM WEMPGVPVEA 240
  241 FSSRSQTIRE AVGDDASLKS RDVAALDTRK SKQHVDPEVK MAEWMQTLKD TGFDISAYRE 300
  301 AADRRAEIQA AQPVPSQEQP DIQQAVTQAI AGLSDRKVQF TYTDVLARTV GMLPPGSRRD 360
  361

Type	Start	End	Confidence
Signal Peptide	1	20	0.74
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	360	0.99