YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|409708\|gb\|AAA...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPGHDREKI VNIEERIPKI KEQRKQKANR RLISFIMLFF IMVLIIVYLQ TPISKVSTIS  60
   61 VTGNENVSKK EIIELSDINS GDTEFWSLDK KKTEKKIQQN KLVKKAEISK SLPNKINIAI 120
  121 EEYKAIAYLE KDDVYYEVLE NGSVLPNEVT PDDAGPILVN WTNAKKRSQM AKQLDALSNS 180
  181 LKQSISEIYY TPVKMDENRI KLYMNDGYVV TASIKTFADR MKTYPSIISQ LSSNKKGIIH 240
  241 LEVATYFEEF GKNDKAAKKE DEN

Type	Start	End	Confidence
Cytoplasmic	1	31	0.96
Transmembrane Helix	32	50	0.96
Non-Cytoplasmic	51	263	0.99