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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SUIS_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKKFSALE ISLIVLFIIV TAIAIALVTV LATKVPAVEE IKSPTPTSNS TPTSTPTSTS  60
   61 TPTSTSTPSP GKCPPEQGEP INERINCIPE QHPTKAICEE RGCCWRPWNN TVIPWCFFAD 120
  121 NHGYNAESIT NENAGLKATL NRIPSPTLFG EDIKSVILTT QTQTGNRFRF KITDPNNKRY 180
  181 EVPHQFVKEE TGIPAADTLY DVQVSENPFS IKVIRKSNNK VLCDTSVGPL LYSNQYLQIS 240
  241 TRLPSEYIYG FGGHIHKRFR HDLYWKTWPI FTRDEIPGDN NHNLYGHQTF FMGIGDTSGK 300
  301 SYGVFLMNSN AMEVFIQPTP IITYRVTGGI LDFYIFLGDT PEQVVQQYQE VHWRPAMPAY 360
  361 WNLGFQLSRW NYGSLDTVSE VVRRNREAGI PYDAQVTDID YMEDHKEFTY DRVKFNGLPE 420
  421 FAQDLHNHGK YIIILDPAIS INKRANGAEY QTYVRGNEKN VWVNESDGTT PLIGEVWPGL 480
  481 TVYPDFTNPQ TIEWWANECN LFHQQVEYDG LWIDMNEVSS FIQGSLNLKG VLLIVLNYPP 540
  541 FTPGILDKVM YSKTLCMDAV QHWGKQYDVH SLYGYSMAIA TEQAVERVFP NKRSFILTRS 600
  601 TFGGSGRHAN HWLGDNTASW EQMEWSITGM LEFGIFGMPL VGATSCGFLA DTTEELCRRW 660
  661 MQLGAFYPFS RNHNAEGYME QDPAYFGQDS SRHYLTIRYT LLPFLYTLFY RAHMFGETVA 720
  721 RPFLYEFYDD TNSWIEDTQF LWGPALLITP VLRPGVENVS AYIPNATWYD YETGIKRPWR 780
  781 KERINMYLPG DKIGLHLRGG YIIPTQEPDV TTTASRKNPL GLIVALDDNQ AAKGELFWDD 840
  841 GESKDSIEKK MYILYTFSVS NNELVLNCTH SSYAEGTSLA FKTIKVLGLR EDVRSITVGE 900
  901 NDQQMATHTN FTFDSANKIL SITALNFNLA GSFIVRWCRT FSDNEKFTCY PDVGTATEGT 960
  961 CTQRGCLWQP VSGLSNVPPY YFPPENNPYT LTSIQPLPTG ITAELQLNPP NARIKLPSNP1020
 1021 ISTLRVGVKY HPNDMLQFKI YDAQHKRYEV PVPLNIPDTP TSSNERLYDV EIKENPFGIQ1080
 1081 VRRRSSGKLI WDSRLPGFGF NDQFIQISTR LPSNYLYGFG EVEHTAFKRD LNWHTWGMFT1140
 1141 RDQPPGYKLN SYGFHPYYMA LENEGNAHGV LLLNSNGMDV TFQPTPALTY RTIGGILDFY1200
 1201 MFLGPTPEIA TRQYHEVIGF PVMPPYWALG FQLCRYGYRN TSEIEQLYND MVAANIPYDV1260
 1261 QYTDINYMER QLDFTIGERF KTLPEFVDRI RKDGMKYIVI LAPAISGNET QPYPAFERGI1320
 1321 QKDVFVKWPN TNDICWPKVW PDLPNVTIDE TITEDEAVNA SRAHVAFPDF FRNSTLEWWA1380
 1381 REIYDFYNEK MKFDGLWIDM NEPSSFGIQM GGKVLNECRR MMTLNYPPVF SPELRVKEGE1440
 1441 GASISEAMCM ETEHILIDGS SVLQYDVHNL YGWSQVKPTL DALQNTTGLR GIVISRSTYP1500
 1501 TTGRWGGHWL GDNYTTWDNL EKSLIGMLEL NLFGIPYIGA DICGVFHDSG YPSLYFVGIQ1560
 1561 VGAFYPYPRE SPTINFTRSQ DPVSWMKLLL QMSKKVLEIR YTLLPYFYTQ MHEAHAHGGT1620
 1621 VIRPLMHEFF DDKETWEIYK QFLWGPAFMV TPVVEPFRTS VTGYVPKARW FDYHTGADIK1680
 1681 LKGILHTFSA PFDTINLHVR GGYILPCQEP ARNTHLSRQN YMKLIVAADD NQMAQGTLFG1740
 1741 DDGESIDTYE RGQYTSIQFN LNQTTLTSTV LANGYKNKQE MRLGSIHIWG KGTLRISNAN1800
 1801 LVYGGRKHQP PFTQEEAKET LIFDLKNMNV TLDEPIQITW S

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