YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4521223
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGAEAGARA TFGAWDYGVF ATMLLVSTGI GLWVGLARGG QRSADDFFTG GRQLAAVPVG  60
   61 LSLAASFMSA VQVLGVPAEA ARYGLKFLWM CAGQLLNSLL TAFLFLPIFY RLGLTSTYQ

Type	Start	End	Confidence
Cytoplasmic	1	13	0.73
Transmembrane Helix	14	37	0.88
Non-Cytoplasmic	38	53	0.74
Transmembrane Helix	54	76	0.91
Cytoplasmic	77	86	0.69
Transmembrane Helix	87	110	0.87
Non-Cytoplasmic	111	119	0.71