YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9858777
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSIALRQA RHLTTTAAAV ASSPSTITIS ISKAKSKLKV EHDPDKAFEI YSSVYDRYVS  60
   61 SMSSRYAQEF TVKRLAKSHR FSDIENFLES HKNRPKIFIH NSFLWCRRHL LDEISVKYGF 120
  121 LPDKVSYDIL IRSYCEMRSS KMAIKILKVI EEKSVEITTI TFTTILHSFY KKGKNDEAEK 180
  181 VWNEMVNKGC GPDVGAYNVK IINIQGERQR LAPLSQHGRS NNTNTQILNR GPVSHTLSFI 240
  241 CPTMPSVKPL ATAAGALRAR VSSGLRTRGG HGPNPFTTAG HQDRPNGYLF NRVPPPPGQS 300
  301 RKWEDWELPC YITSFFTIVI LGVGLNAKPD LTLETWAHQE ALKRLELESA DAE

Type	Start	End	Confidence
Signal Peptide	1	30	0.89
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	353	0.97