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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13699916, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRGNENRLT HRRQTVLREK GRRLANRGPA YMFNDHSTSL SIEEERFLDA AEYGNIPVVR  60
   61 KMLEECLSLN VNCVDYMGQN ALQLAVANEH LEITELLLKK ENLSRVGDAL LLAISKGYVR 120
  121 IVEAILNHPA FAEGKRLATS PSQSELQQDD FYAYDEDGTR FSHDVTPIIL AAHCQEYEIV 180
  181 HTLLRKGARI ERPHDYFCKC TECSQKQKHD SFSHSRSRIN AYKGLASPAY LSLSSEDPVM 240
  241 TALELSNELA VLANIEKEFK NDYRKLSMQC KDFVVGLLDL CRNTEEVEAI LNGDAETRQP 300
  301 GDLARPNLSR LKLAIKYEVK KFVAHPNCQQ QLLSIWYENL SGLRQQTMAV KFLVVLAVAI 360
  361 GLPFLALIYW CAPCSKMGKI LRGPFMKFVA HAASFTIFLG LLVMNAADRF EGTKLLPNET 420
  421 STDNARQLFR MKTSCFSWME MLIISWVIGM IWAECKEIWT QGPKEYLFEL WNMLDFGMLA 480
  481 IFAASFIARF MAFWHASKAQ SIIDANDTLK DLTKVTLGDN VKYYNLARIK WDPTDPQIIS 540
  541 EGLYAIAVVL SFSRIAYILP ANESFGPLQI SLGRTVKDIF KFMVIFIMVF VAFMIGMFNL 600
  601 YSYYIGAKQN EAFTTVEESF KTLFWAIFGL SEVKSVVINY NHKFIENIGY VLYGVYNVTM 660
  661 VIVLLNMLIA MINSSFQEIE DDADVEWKFA RAKLWFSYFE EGRTLPVPFN LVPSPKSLLY 720
  721 LLLKFKKWMS ELIQGHKKGF QEDAEMNKRN EEKKFGILGS HEDLSKFSLD RNQLAHNKQS 780
  781 STRSSEDFHL NSFSNPPRQY QKIMKRLIKR YVLQAQIDKE SDEVNEGELK EIKQDISSLR 840
  841 YELLEEKSQN TEDLAELIRK LGERLSLESK QEESRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle