YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4104409
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLLYSAVVL LSLQNLVIAE CPGVVTRDVW DALSPLHTKY VTRPVNIVII MHTVSTQCTT  60
   61 DEACEIRMQS LQNYHMEDVG NWDIGSSFYV GSNKKIYEGV GWLRSGSHTY GYNDKSIGIN 120
  121 FIGNYNKDVP TDDQLNAVRD LLKCGVEQGH LTQDFHVVGQ RQLMATEGPG RKLYAAIRKW 180
  181 PEWLEDTSSI KSTTT

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	195	0.99