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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83315603
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLSSIVFI ICLLLCNNAI SNEVIESPPS EGTLAGGGGG GGSGSGADGD TGGGTDSQDG  60
   61 KGDGKGEGKG EGKGETVGDK GKNNEGSQTD QELQTNPGSD QDSGSSGNKV PGAPSDDVNN 120
  121 PTGDLSTGLS GGKVTGASSD HVPGPTGEQG SDSKGGQKKE QPPPKEPAPT TPKEPAPTTP 180
  181 KEPEPTTPKE PEPTTPKEKA GDDPEKQVSP EGSASKTVEK KELSSSGDSL PSSSEDPGSP 240
  241 QKKPAGEEDP PSPPKKEESL PAKKPEAPPA KPAAPESLKV SQAGLDPNAQ KQGQGKRPKR 300
  301 ALPPQVQVPQ VNDITDMESY LLKNYDGVKV IGLCGVYFRV QFSPHLLLYG LTKFSIIQIE 360
  361 PFFERVRIDF EHQHPIKNKC APGKAFAFIS YIKDNILTLK WKVFTPPSDL FANEVVKEKI 420
  421 LSTVPEEPIT EDESPVLVDV RKYRLPPLER PFTSIQVYKA NTKQGLLETK NYILKNAIPE 480
  481 KCSKISMDCF LNGNVNIENC FKCTLLVQNA KPTDECFQYL PSDMKNNLDQ IKISGQSDED 540
  541 TKENDLIESI EILLNSFYKV DKKTKKMSLI TMDDFDDVLR TELFNYCKLL KELDTKKTLE 600
  601 NAELGNEIDI FNNMLRLLKT NEGETKLNLY KKLRNTAICL KDVNTWAEKK RGLILPEELT 660
  661 QDQMTEGQNE EPNDEDPDDR VDLLELFDDN QDENIVDKDG IIDMSMAIKY AKLKSPYFTS 720
  721 SKYCNYEYCD RWQDKTSCIS NIDVEEQGNC SLCWLFASKL HIETIRCMRG YGHNRASALY 780
  781 VANCSERTGE EVCNDGSNPL EFLKILEKNK FLPLESNYPY LWKNVSGTCP NPQNDWTNLW 840
  841 GNTKLLYNNM YGQFIKHRGY IVYNSRFFAK NMDVFIDIVK REIRNKGSVI AYIKTQGVID 900
  901 YDFNGRYISN ICGHSHPDHA VNIIGYGNYI SDNGEKRSYW LIRNSWGYYW GHEGNFKVDV 960
  961 LGPDNCVHNV IHTAIVFKID MEPDNASKND DQLVDESDKS YFPQLSSNFY HSLYYNNFEG1020
 1021 YEAKNDDEND QNYDKVDVSG QSEGNQTDLK NGQTDPQKTQ TDRTVTQPGA SPTENPGTAG1080
 1081 SNLTTQNTGG SSPTVTDTSS PTTTVTETPG VTTSAATASI EKKIQILHVL KHIENYKMTR1140
 1141 GLVKYDNLND TKSDYACARS YAYDPKNHNE CKQFCEENWE RCKDHYSPGY CLTTLSGKNK1200
 1201 CLFFQIHLTH DGCLYSKLYI FIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle