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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83273689
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNNVERREG EDGDDSNDVF LYNNETHHGS EFCNILCIFI FFMALFIIMI AIVDNKAPNN  60
   61 NDRNYNSENE NISNNLTNDD VINNFLENAV IQSFDFKGNY KIKKKNKIKH EQDRIFSPKN 120
  121 EQGGNIFEGK IVTLKLALQN ITKSFLFLHF YPTNVNIKEI KNEKNNPEIR NEWNNKVGSN 180
  181 YYLIYEQRNK KDDKKFEYIG MTGININTSQ NYIFNGNGYN ISTFCNDVLK ENCICNYTAH 240
  241 IKLNTKINQL TSIREIEETY FYSLKKYIID EQNYFNNTIN EKYRKYYKQT MEAVSSHLPG 300
  301 GDIEKGANNI GINNIGSGSG SGSGIDNNGS SGSDGGGGHY QGVLMSNDCD FEVSLEGYDE 360
  361 DNVYFSKKVR NFILMYNLKS LIELGLFYKQ IKNSENVRNA SKISIITICL NSYIEIFEAL 420
  421 ILLYQVLFSK LLLTSYMAMI MFKFVLYTLM EIRYILLIWK ANNSNNSGNN NWEYMQKQLS 480
  481 ILYKYYYGFV LLLIAIFYYI FPYFPYLILF IYLCWVPQIC LDIWKGQHKS ISLSFVFLLS 540
  541 ACRLFLPIYI FMYPYNIFQL DIFSKVGELS NITFSFIIIF CILLQLIFMY IQRIYGPRYL 600
  601 FNINLLPHVH NYYQNLDPNF EAGIQECVIC MYNIILNNKK YCITPCYHIF HEKCLQQWMT 660
  661 IKMECPTCRG SLPNFP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle