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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23486814
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTKKLLSFN LFLIIILTFE NLTFDKKNTC MINNTIRPNS CGIVNRVLRE KPYHYSSKIS  60
   61 KSIPFIQNFS LEKNFTGESL QKNILNNINK LGGAHLFHIS KSHLAAKAGN KNTEFIGEAT 120
  121 ELFKGFKRNF GINMTENKQT NIGRMLCEDD NNNGGEVTST EKTIFKNSKD PQIHYRTDYK 180
  181 PSGFTIDNVT LNINIFDNET IVRSSLNMCT NENYADEDLV FDGVGLSIKE ISINNNKLNE 240
  241 GEDYTYDNEF LTIFAKNVPK ENFVFLSEVV IHPETNYALT GLYKSKDIIV SQCEATGFRR 300
  301 ITFFIDRPDM MAKYDVTLTA DKTKYPVLLS NGDKLNEFDI PGGRHGARFN DPHLKPCYLF 360
  361 AVVAGDLKHL SDNYVTKYTK KPVELYVYSE AKYVSKLKWA LECLKKAMKF DEDYFGLEYD 420
  421 LSRLNLVAVS DFNVGAMENK GLNIFNADSL LASKKTSIDF SFERILTVVG HEYFHNYTGN 480
  481 RVTLRDWFQL TLKEGLTVHR ENLFSEETTK TATFRLTHID LLRSVQFLED SSPLSHPIRP 540
  541 ESYISMENFY TNTVYDKGSE VMRMYQTILG DEYYKKGIDI YLKKHDGGTA TCEDFNDAMN 600
  601 EAYQMKNGNT DENLDQYLLW FSQSGTPHVT AEYIYDENEK TFTINLSQIT YPDDNQKEKY 660
  661 PLFIPVKVGF ISPKDGKDVI PEVVLELKKD KESFVFQNVS EKPIPSLFRE FSAPVYIKDN 720
  721 LTDEERIALL KYDSDAFVRY NVCIDLYMKQ IIKNYNELVS QKTKENDLVE LSLTPVNDEF 780
  781 INAIKHLLED KHADPGFKAY IIALPRDRYI MNYIKEVDPI VLADTKDYIY KQIGSRLNPI 840
  841 LFSIFQNTES KANDMTHFKD ESYIDFDQLN MRKLRNSILV MLSKAQYPHM LKYIKEQSKS 900
  901 AYPSNWLASL SASAYFSGDD YYDLYDKTYK LSKNDELLLQ EWLKTVSRSD RSDIYSIIKK 960
  961 LEVEILKDSK NPNNIRAVYL PFTANLRAFN DISGKGYKLM ADVIMKVDKF NPMVATQLCD1020
 1021 PFKLWNKLDL KRQALMHDEM NRMLSMENIS PNLKEYLLRL TNKM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle