YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83032731
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLLLSLLV FQNITTYFDN FKNSGIIERN GGAENSNAHI YICIIMLNDD IENAKYNFNS  60
   61 NKYYYDSNIH KDYYDANEYD RETSFLETDE YDEEPDNEKD DDNEYEESFL ETDEYDEEAD 120
  121 NENDDDNEHE ESFLETDEYE EEADNENDDD NEHEESFLET DEYDEEADNE NDDDNEHEES 180
  181 FLETDEYEEA DNENDDDNEH EESFLETDEY EEADNENDDD NEHEESFLET DEYEEADNEN 240
  241 DDDNEHEESF LETDEYDEEA DNEKDDDNEN EESFLETDEY DEEADNENDD DNEHEESFLE 300
  301 TDEYDEEADN ENDDDNEHEE SFLETDEYDE EADNENDNND FESDEDNYAN DINSSTTAQS 360
  361 FIEKDDLYFD DFFDSEETIK DAVKKGSKNK NSNTSSRNDS TKNMIKKLNK TSNVEFKNKN 420
  421 SFNEEDNQYE FSGVKSETNK QSLRSPNKNG AQSNLKDKKD KNTQNNMGQI NLEEYEITND 480
  481 ELPSDIMSEA YDALAPTLHK KEKSNNESTK YKLKNNSSTK DPKYVPYKKG ENSISPHIHA 540
  541 DVYKKNKKMD EMLEEYEQEL SNDDIMELES HNEEDTPVIA ETEDHDGDDG NYLHLSSFLD 600
  601 RFFLFGIL

Type	Start	End	Confidence
Signal Peptide	1	16	0.72
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	608	0.99