YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|182403
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSGETVPAMS AAMRERFDRF LHEKNCMTDL LAKLEAKTGV NRSFIALGVI GLVALYLVFG  60
   61 YGASLLCNLI GFGYPAYISI KAIESPNKED DTQWLTYWVV YGVFSIAEFF SDIFLSWFPF 120
  121 YYILKCGFLL WCMAPSPSNG AELLYKRIIR PFFLKHESQM DSVVKDLKDK AKETADAITK 180
  181 EAKKATVNLL GEEKKST

Type	Start	End	Confidence
Cytoplasmic	1	42	0.89
Transmembrane Helix	43	65	0.86
Non-Cytoplasmic	66	99	0.72
Transmembrane Helix	100	124	0.70
Cytoplasmic	125	197	0.83