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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15021761
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFSRIGRAL SRSSRVKNLL HGDSRLGALS GVPRIDVYSE GVEGGLGFFR GYVSSSVARN  60
   61 NGFVSNLSGF KSVAGNPRFL RLFSSEAPKK KNYENFYPKG QKEVPKGGDK KNESKEDSKS 120
  121 NTEDQGGFQE AFMKQFQSFL TPLLVMGLFL SSFSFGPREQ QQISFQEFKN KLLEPGLVDH 180
  181 IVVSNKSVAK IYVRNSPRDQ ADSEVLQGNL PAKGSSGHYK YYFNIGSVES FEEKLEEVQE 240
  241 TLGVDPHDNV PVTYSSELVW YQELMRFAPT LLLLGTLLYM GRRMQGGFGV GGGGGGKGAR 300
  301 GIFNIGKAHV TKVDKNAKNK VYFKDVAGCD EAKQEIMEFV HFLKNPKKYE ELGAKIPKGA 360
  361 LLVGPPGTGK TLLAKATAGE SGVPFLSISG SDFMEMFVGV GPSRVRNLFQ EARQCAPSII 420
  421 FIDEIDAIGR KRGRGGFSGS NDERESTLNQ LLVEMDGFGT TAGVVVLAGT NRPDILDNAL 480
  481 LRPGRFDRQI TIDVPDIKGR DQIFQIYLKT IKLDHEPSYY SQRLAALTPG FAGADIANVC 540
  541 NEAALIAART DEAQVTMDHF EAAIDRIIGG LEKKNKVISK LERRTVAYHE AGHAVTGWFL 600
  601 EHTDPLLKVT IVPRGTAALG FAQYVPNENL LKTKEQLFDM TCMTLGGRAA EKVLIGTIST 660
  661 GAQNDLEKVT KMTYAQVAVY GFSEKVGLLS FPQREDSMEM TKPYSSKTGA IIDTEVREWV 720
  721 NKAYERTIQL IEEHKAKVAE IAELLLEKEV LHQEDLLRVL GERPFQSAEP THYDRFKLGF 780
  781 QDEEKVVETT VNEAKDDGGS SPLEPEVVPT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle