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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|780291
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMNVAAPAA AVAGAAAPQP GQNQTGSSYT MASLYVGDLH PDVNESILFE KFSAAGPVLS  60
   61 IRVCRDNATR LSLGYAYVNF QQPADAERAM DTMNFEALHG KPMRIMWSQR DPAMRRSGAG 120
  121 NIFIKNLDKV IDNKSIYDTF SLFGNILSCK VAIDEDGFSK GYGFVHFETE EAAQNAIQKV 180
  181 NGMLLAGKKV FVGKFQPRAQ RNRELGETAK QFTNVYVKNF GDHYNKETLE KVFAKFGNIT 240
  241 SCEVMTVEGK SKGFGFVAFA NPEEAETAVQ ALHDSTIEGT DLKLHVCRAQ KKSERHAELK 300
  301 KKHEQHKAER MQKYQGVNLY VKNLDETVDD DGLKKQFESY GNITSAKVMT DENGRSKGFG 360
  361 FVCFEKPEEA TSAVTEMNSK MVCSKPLYVA IGQRKEDRRA QLASQYMQRV ASMRMHGNVP 420
  421 GAAMYNPTQP GPGYYVANPM QQQRNFAGGQ QMVRPGGRWG MQNQYPVQNQ YMMAQGPGVY 480
  481 QNRMGRPQNQ QGGPRGPPQQ YNQVAQGGVR MQGPPRTQNP GVQQQNVPRP PQQQQQQRPA 540
  541 PTGPKAPPQP YQAYQQRPQG IVIGGQEPLT SAMLAAAAPQ EQKQLLGERI YALIEKLYPG 600
  601 HKDAGKITGM MLEIDNSELI MMLQDSELFR SKVDEAASVL VSAQKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle