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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|603472
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQSDEDNLD SSETTASTSY SGTSSVSSRL QLRTSLFFEN LNGAHGNPDA ETEMATVAYE  60
   61 TTSRGQGFAV YINNERFSQI MGASTSSSSS SNSSSITQFH DTQDNNIPSN TTVRPTSLRR 120
  121 DNEDTVPLRN VTPSQNAAVW PERAMNSPSS QRLSCALTIS TSVLMGEDVE GSPIEQEHSR 180
  181 VVSSLYSSLA NRGNDESKNG TPPRPTSIEP NETTEHSFFS CHYDDTLEPD VEEAVRLTKN 240
  241 KTSNVNFISS TGSKGEGETE DEVIDQYEPV NESKFIPHKL KIPEKAGSIK SSTSDDSHSP 300
  301 GAPGTSARKI KIPQSPSLIG NILIPSHNSD SSNESSPKDH IGHNNEEKFN SKSMRKPSTS 360
  361 LEEEGPPIGL PSIPVLRSVS GPSKWTKTPL RLESGNSTKS DPFSRYEGHK TPSPLTKMNK 420
  421 KNKTLPEHGQ PLVLAPIKSQ SSESDTGQNS IIEKPARSIR RKQQEKTDNR KEDRHDAENI 480
  481 DLEARMPIQH IDTASIHSFD SGQNGFRDVY SIENIIVILL CCSIVPPLFF IIGCSSRRKL 540
  541 VSDYRLMRLL MNKEHRAALL QGFIWDVDLR WFRMFCLILG AAETVIVMAG IAIGFGVGIT 600
  601 LE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle