YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|736416
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKYALVGDV GGTNARLALC DIASGEISQA KTYSGLDYPS LEAVIRVYLE EHKVEVKDGC  60
   61 IAIACPITGD WVAMTNHTWA FSIAEMKKNL GFSHLEIIND FTAVSMANPM LKKEHLIQFG 120
  121 GAEPVEGKPI AVYGAGTGLG VAHLVHVDKR WVSLPGEGGH VDFAPNSEEE AIILEILRAE 180
  181 IGHVSAEACL SGPGLVNLYR AIVKADNRLP ENLKPKDITE RALADSCTDC RRALSLFCVI 240
  241 MGRFGGNLAL NLGTFGGVFI AGGIVPRFLE FFKGSGFRAA FEDKGRFKEY VHDIPVYLIV 300
  301 HDNPGLLGSG AHLRQTLGHI L

Type	Start	End	Confidence
Cytoplasmic	1	243	0.55
Transmembrane Helix	244	265	0.71
Non-Cytoplasmic	266	321	0.70