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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|9837545
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPHLALLLL AAGAARALEV PADGNAGLLA EPQIAMFCGK LNMHMNVQNG KWESDPSGTK  60
   61 TCIDTKEGIL QYCQEVYPEL QITNVVEANQ PVTIQNWCKR GWKQCNGHPH IVVPYRCLVG 120
  121 EFVSDALLVP DKCKLLHQER MDVCETHLHW HTVAKESCSE KSMNLHDYGM LLPCGIDKFR 180
  181 GVEFVCCPLA EESDNLDSAD AEDDDSDVWW GGADADYADG SDDKVVEEQP EEDEELTVVE 240
  241 DEDADDDDDD DGDEIEETEE EYEEATERTT SIATTTTTTT ESVEEVVRVP TTAASTPDAV 300
  301 DKYLETPGDE NEHAHFQKAK ERLEAKHRER MSQVMREWEE AERQAKNLPK ADKKAVIQHF 360
  361 QEKVESLEQE AANERQQLVE THMARVEAML NDRRRIALEN YITALQTVPP RPRHVFNMLK 420
  421 KYVRAEQKDR QHTLKHFEHV RMVDPKKAAQ IRSQVMTHLR VIYERMNQSL SFLYNVPAVA 480
  481 EEIQDEVDEL LQKEQNYSDD VLANMISEPR ISYGNDALMP SLTETKTTVE LLPVDGEFSL 540
  541 DDLQPWHPFG VDSVPANTEN EVEPVDARPA ADRGLTTRPG SGLTNVKTEE VSEVKMDAEF 600
  601 RHDSGYEVHH QKLVFFAEDV GSNKGAIIGL MVGGVVIATV IVITLVMLKK KQYTSIHHGV 660
  661 VEVDAAVTPE ERHLSKMQQN GYENPTYKFF EQMQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle