YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|437310
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISFLVLL LFALYIIPQG LANYEKPPEY KPPVENPQFY KPHIEKPPVH KPLVEKPPTH  60
   61 HPPIEKPPIY KPPVEKPPAY KPPVEHHPVY KPSVEKPPVH KPPVEKPPVH KPPVEKPPVH 120
  121 KPPVEKPPVH KPPVEKPPVH KPPVEKLPVY KPSVEKPPVY KPPVEKPPLH KPLVEKPPVH 180
  181 KPPVEKPPVH KPPVEKLPVY KPPVEKPPVY KPHVEKPPVN KPPVEKPPVH KPPVEKPPVH 240
  241 KPPVEKLPVY KPHVEKPPVY KPLVEKPPLH KPPVEKTPMH KPPVEKPPVH KPPVEKPPVE 300
  301 KLPVYKPPVE KPPVYKPHVE KPPLHKPPVE KPPVHKPPVE KPPVHKPPVE KLPVYKPPVE 360
  361 KPPVYKPHVE KPPLHKPPVE KPPVHKPPVE KPPVHKPPVE KPPVHKPPVE KLPVYKPPVE 420
  421 KPPVYKPPVE KPPVHKPPVE KPPLHKPQVE KPTEYKPPIE KFPVYKPPVE KPQVHKPPVE 480
  481 KPPVHKSPVK KLPVYKPPAE KPPVYKPPVE NPPVHKPLVE KPPVYKPPVE KPPVHKPPFE 540
  541 KPPIYTPPL

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	549	0.99