YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23480152
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYLTFNKSS KDAFDLNEKI EATKIDLSNP LLLQYNWVIW EQVSDNKIKQ SNNYKDYTRP  60
   61 LAKFNSVQKF WQLWNRLPQP SDLLTQRSMT RFSDDGIFRI VDALMIFRDN IQPMWEDPAN 120
  121 AGGGHFEYKI LPKDFPYSQI DEFWNNLVLA IIGCSLKHYD LITGIRLVDK LSTTRYGYIR 180
  181 IEIWYTTITD ENVRNHLRKD LEEHMCNRID GSHVYPPRVK SLSHVHKIRI TLEFIYNPYY 240
  241 LFLWVFIFFF F

Type	Start	End	Confidence
Cytoplasmic	1	229	0.64
Transmembrane Helix	230	248	0.66
Non-Cytoplasmic	249	251	0.71