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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82538841
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRISLYDFV LDEIKGGRYY EPYQSDNENS EQNGNGEKEG MGNNLKHMSY SNINQNTEEN  60
   61 KHDFYKFLDD LFKTHTIPDN ALEHMIYVPI FFEKIMSLSF LLCLDNILYD ITFMPIQVIR 120
  121 SICILLYILL KNISNNFLNR FIDIKNFKFY KYATTCNFKY LKRYKARVIK NSNKFINTEM 180
  181 IRTGKKIKTN DTNDLDNKNS IYDYSYNFKN YTFDKFYGHH DIDGFTYNQN VSNSEDVIVS 240
  241 GENDSINNSM ENNLVLMKIK EAKTGGDEFN TTCSHSDIEN NNTSSLDILD NKNIGSSDEY 300
  301 HSNYSSSFYA PKLYYVDSEY SEKIYYKKSI RDALVKKKSL VNFNYAYSRS IGDGNSFEIN 360
  361 RKGFGRKRKK KENFKLYRIS SFDKNVKKNR IFILIYFLFK PFNFVTKKLF NFFKYIVKYF 420
  421 YSFFLIIYMN IIHFFHIKKL YTFNDVKKED KTKIITRSLE IKYLSSKQQT GDNVKNEKND 480
  481 DHDDCVQVYK ENLNPAQEMN NVSAQIKACD RDLQQSEFEK DGNDENDEKD EKDENDENDE 540
  541 KDENDENDEK DENDEKDEND EKKGNEKNGE INYSENTVHE SNVEKNQQIE TENTTNESGK 600
  601 AVNFTDIRNV VNKYISNKKL NEKHNLKKRK EENDVNCKDK NIIYEKNQEN KKINNEAKNE 660
  661 GFTMNGQNDN NYFYYTCNEQ YSEKKKKKNV KNVKYMKKKL LKDHINFLNL SFPEYSGLIR 720
  721 ASLILICIYI FSFLDTSRIY HYIRAQPFMK LYVVLNMLEI LERLLRSLGK DLIDNMIRTF 780
  781 IRIINLRSYI YIIRNHYNNM TNDDENFSNE SLEGRRKKTY IINNSNILHE EGNGKKKNEK 840
  841 IKFSEIFTKE YRKNSDIYIN YKGINLKKNN KNNVNTNPYF NKEKNMFSFL KNNNEMAANF 900
  901 KLPIFYPFLS ILIKFILQYI CVLIYILTHA FAHLIRFLSL NIAINSSEST MFLILVMSNF 960
  961 TEIKSTVFKK FTKISLFTIV ASDSVERFYL FIDAFLVLLK MSTAYRTQNS FLSITSWLII1020
 1021 ILLLEVGVDW CKHSYLLKYN KLKSESLIRY FQTLLADVLI SRTTNNNIYY MNTLSFEVPC1080
 1081 KNIFSFSHIP TRRLGYMSMP VVTLIVCSLP RLNYLSNISL LSFALSIWIC LFLFKIILSI1140
 1141 MIVSYTISEK HQLKNLKKPY DDISAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle