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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23478152
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLWIYLVL LHILLFNLCN NVIKKCTPSL NSYFYKSNTF KYNKKRKKNN FQYPHYIYNI  60
   61 YNYATKKKNL LKNCTHHFGK TYSHNNDILK KKKYEQFRKF KSVRQKLFYF SNTICLNGHN 120
  121 KYDLLKKKVK RKREENEKDH STMPISLSFF DENEHGADTN KKNESLSNGD TNYDDTNESL 180
  181 SNDDTNGEEK KNLNEVSTSY TDQRNEQNFS QAIKKTEEYI KGKEDNIIEE REIIKKKKVI 240
  241 ENLKAQENVF SDKPLDLSMH DILKHIYKNE IYNSSKVLVN NICVWMKSAY VNFLKSKRDE 300
  301 LKRDELKKEQ NEIASNVTKT INNSNEKKVV DNNISNDHDN EKKDCYNFIF DKNDDEKLGT 360
  361 YVESLKLYNK KNLSKYFFSF NRGNILKQLV TEGEDDILDE EKEKNGINKK KNDIKKELAI 420
  421 QDKNNTIFDD HVQAVLSNPM LKEDENYYID KNRYMKSNVT IEFNIYDTYN DKIILNNKNT 480
  481 NSTMIEFPLL YSHNIIQKCI LTMKKLEKSI FYINNNLLFR NFISNDQPVT DHDKSVYDVI 540
  541 LNENWIKIEM HLCNIYGMNE KWMGISPNSF SSDQKTKSFF SEYSLGSSNN LIGAPTVSRT 600
  601 GPVASKTGPV ASKTDPVASK TGPVASKTDP VASQTDPIAS KTDPVASKTD PVAMDPNSKP 660
  661 NFEKEPNEMN KIDDEIHKKL DGIINDNKKM SNQNKSEISE RQKEILKRRE EHETRKELEI 720
  721 KSEFLLKKLE NEMKYDPDHY MWKDLYPQLD EHHKKRTDKY FDDLKKEMSE NKYSRGYTDN 780
  781 IKKKQTLKGY NLGEEIEGIT KYYFWKENIH SFSLYFLLHL YVKKTDILID IDNHFFSLSI 840
  841 CGHTIIKDMF NHPINSSDSV WTLTDNDQAA IIPKNGNNNN SNNNSNNNSK DLPVYEITYI 900
  901 DEQDIKKIIK KKYCLIYNIY KDNNHKYMWG SIFKTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle