YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14090280
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPRSKIRTI IVFCLFLAIA GIIGFGYFCQ DQVCALSKRA VILQSSDILA YNELPLHQAN  60
   61 SINGNANGNS NGNGNSVGGI TAMASKSSAP QNIIANAGLS YEDVLNDDFQ FDMDGHDVMV 120
  121 FLHIQKTGGT SFGRHLVRDL DLKRPCECQR QRKRCYCFRP HRNENWLFSR YSTGWKCGLH 180
  181 ADWTELTSCV DVELDKNEGE TAKRRYFYIS LLRQPIARYM SEYRHVRRGA TWKGSRHWCL 240
  241 GRQATAAELP ACYKGKDWLD VDLDQFAGCE SNLAANRQTR MLADLALVGC YNKSSMPAHE 300
  301 RDRVMLASAK RNLAAMAYFG LTEYQKMSQY IFEETFNLRF AIPFEQHNTT ISATAVQNLR 360
  361 PDQKRRIEKL NSLDIELYAF AKTLLFQRFE HLKAKDTNFE QRYANLGNIY FKQGVTEFNW 420
  421 DSNVEDGLST DH

Type	Start	End	Confidence
Cytoplasmic	1	8	0.78
Transmembrane Helix	9	29	0.81
Non-Cytoplasmic	30	432	0.99