YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PTSP_BOMMO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWCLFALWV FGVATVVTAA EEPHHDAAPQ TDNEVDLTED DKRAWSSLHS GWAKRAWQDM  60
   61 SSAWGKRAWQ DLNSAWGKRG WQDLNSAWGK RAWQDLNSAW GKRGWQDLNS AWGKRDDDEA 120
  121 MEKKSWQDLN SVWGKRAWQD LNSAWGKRAW QDLNSAWGKR GWNDISSVWG KRAWQDLNSA 180
  181 WGKRAWQDMS SAWGKRAPEK WAAFHGSWGK RSSIEPDYEE IDAVEQLVPY QQAPNEEHID 240
  241 APEKKAWSAL HGTWGKRPVK PMFNNEHSAT TNEA

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	274	0.99