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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TGRD1_DICDI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHKMYFFLI LLFSLFIIVY SAPNRVTRNE TSIVYTYSLD SDYYTRFVMY LNATTLRTDI  60
   61 APNYFDCSQI VNSERYCVFH FADSFSRLWG AVYSRVCTRT VSDPTEDCQS TWITDNAFPE 120
  121 PLNVKFSGYP STSGGDVVFT GLFLRLAGGP NTLANSFTNP SKTFLIKVHG NFSDPNFNCN 180
  181 NFTATFPPSS GYIKVYFDDT GKSSLQLRYA SPTVSSFILD ESKKLVTING DNYFTKNSLV 240
  241 QVFFDGIIQN NINITVNHSQ IQVNNFIRVD PGPMSVNITI NAVSIDNNYT YCFPAVISSI 300
  301 SSVSNHLGGV VTIKGSKLSS TSIIPTIKIG DKQCTFIKST TTELECQLEP NETGGKHLPV 360
  361 DVNFGGCNST SSGSDAVTFT YSIPTLSSGT LSNGIVTLIG TNLGTINDSF IQLNSNGAID 420
  421 NVKNDQFNIS SDETTATFKL PLLKCKSFYI NFTRVDISAN NKPSISAPLL IYVINKPTVS 480
  481 NGSINIELYY IDCPISPSST PSITVGNSSS ATQCSIPSLK NLSEYYQTTC SIPYGTGTNK 540
  541 QFKFKYNSEE SNSEFSYEPP KVESRSFSKG LFNITINGNN FGNSTSLIKV YFNGSDISSE 600
  601 IQSLNDNQFT FKRLNSYENG PINITVDGNS NMEPSFYLTL PPVIYSIINK ENKTIGCGGL 660
  661 ITISGKNLLT SDDKFKVRVL ANNENTTVIV PDEKTLIVRA NNKDSPLFVS TLIGDDLGPN 720
  721 TTLTYFEPRI TVIPTVKNKK DGISIRVGGV SLSGIINASL GISSENVSLS CDLQCSLSPN 780
  781 ETFYLSNPIL SSNEKDITNS TDCLSCHSMN SIVVDETSGV LYLQLGPTSY HYDVKIEEIQ 840
  841 SSLNPSSSNG GERKSSKLSG GAIAGITIGC VAGAGALVGS VFYFKLITRV KKAFN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle