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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6683723
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRNKSTKET ARNKKKMKYF RNSFRKSRIG DGASDPDSDW TRSNQRWMKL RTTVQISSAI  60
   61 QKKPPLKRED SFLKRFSTRQ IPETQETVED TGSESASGDV DKSVKRRRRY LQKRRSVVNP 120
  121 DENFYFYWLM MLTVCVLYNL WTLIVRQSFP ELQQSVPTFW LICDSMTDVV FILDIIVQLR 180
  181 TGYLEQGLMV YDDRKLACHY VHSRDFIFDM IALIPLDLLQ LKMGTHPLLR FTRFFKVYRS 240
  241 VRFYYIVESR TVWPNLWRVV NLIHILLILA HWFGCFYFLL SEAEGFQGDW VYPYRPGDYP 300
  301 TLTRKYLGSL YWSTLTLTTI GDLPTPETNA EYIFTIVSYL IGVFIFATIV GQVGNVITNR 360
  361 NANRLEFERL LDGAKTYMRH HKVPGGMKRR VLRWYDYSWS RGRIQGGGDI NTALGLLPDK 420
  421 LKTELALHVN LSVLKKVTIF QECQPEFLHD LVLKMKAYIF TPGDSICRKG EVAREMFIIA 480
  481 DGILEVLSET GKVLTTMKAG DFFGEIGILN LDGLNKRTAD VRSVGYSELF SLSREDVLAA 540
  541 MKDYPDAQEI LQTLGRKRLM EVRCVNKKYA KAQSDKEAAA YAAAHPHHHQ SHHQGQVHQS 600
  601 DSSENSASKK IVDKLKHDVK GFRNVLKKSR TSRKSDESLE MQPLHNTSPR GSKILLKRMS 660
  661 RVRSDEKDAD SAEAKDELHD KTPSPIGAGL PLLQRLRLLK EKQDREERAV KSTPPQKSPP 720
  721 HSHVTCTLSP QESIQEEPER EFSEGFPLIQ RLQQLKIKNE PQANAAEPGV VMVNTPPNIS 780
  781 SKIDSHFAAS QAGASHPGPN GGAIGISAPG QSLTVAQIKP IMKVSFKQKI QQMQGGGGGA 840
  841 SSSPGPSTGA IAKKEPPKSL ALVAKHATSE DPVAAAGLGL GSGSSSGIAT ISKRVVKPQS 900
  901 HRMATPLQSD TDTDGTPIKP WSKLKLATLM SSSYTSLTNC SPDDLASPLK NYSLSNIPQQ 960
  961 METHTRPRHH SARSSSRSPR HGHHHHHHHG HHQHGQLQGP SSTSTNGSTT SQVNQVTASA1020
 1021 KRDCLRLQKP EQHLPDGELT ELGGNGRRKL YQSVFDLSPE YCGLPFVKRL KILNERQKLA1080
 1081 ELERALQTRS FSLDCSKSGP DSKVPITESL YRCYSDTSGI YSQFLSTYES TTSSTSISTN1140
 1141 TSASASASAS ASASASDSNS RQLQYVPLPL SPESNETMER RKLKSILKKL QMGGGQQEEA1200
 1201 GPGTGTGAGA VMGTGSKVNS SASQKGQGLP AEPTLEGPPA SAKEEESPFG GAAAIGSVNN1260
 1261 ACGNGNGNGS VSGNGNGSGT VNDSSANSSS HPSNNGNSAY TCPPPPSVAF PFPVPIAPAS1320
 1321 GSVPLPLEPG VSNVWSPTLT LVAPTNSPQE SFAFPAQLQG ELGGHGTGRG LVGGVGSASA1380
 1381 SMLPAGAGAS ASASASASTS TSTSASYVVE CSASSNQILH AQSTTDLNLN LQLRQNTTSS1440
 1441 MGGPGPAQRI EGFYRNIKKE LKS

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