YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38532005
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGKDEDVRL GANKYGEKQG LGTVAQDRDY KEPPPAPLFE PGELTSWSFY RAGIAEFIAT  60
   61 FLFLYISILT VMGYSRADNK CKTVGIQGIA WAFGGMIFAL VYCTAGISGG HINPAVTFGL 120
  121 FLARKLSLTR AVFYMIMQCL GAICGAGVVK GFQPGPYQVG GGGSNYVHHG YTKGSGLGAE 180
  181 IVGTFVLVYT VFSATDAKRS ARDSHVPILA PLPIGFAVFL VHLATIPITG TGINPARSLG 240
  241 TAIIYNKQIN NWNDHWIFWV GPFIGAALAA VYHTVVIRAI PFKSK

Type	Start	End	Confidence
Cytoplasmic	1	51	0.88
Transmembrane Helix	52	72	0.87
Non-Cytoplasmic	73	88	0.79
Transmembrane Helix	89	112	0.83
Cytoplasmic	113	130	0.72
Transmembrane Helix	131	152	0.91
Non-Cytoplasmic	153	173	0.88
Transmembrane Helix	174	193	0.93
Cytoplasmic	194	205	0.86
Transmembrane Helix	206	226	0.90
Non-Cytoplasmic	227	255	0.90
Transmembrane Helix	256	277	0.92
Cytoplasmic	278	285	0.88