YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37551421
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSSSGAS AAFTPVSQQQ QQMAPENLSS ELQPPAPMQP EAPSEQLCYV HCHFCDTVLV  60
   61 VSVPSSSLFK TVTVRCGHCS SLLTVDMRGL LFPTTTTTVA AESAASAVTT TTSPPPAAAA 120
  121 HHGQFHYPSS LNLAPGNPPR HSLLDEISSA NPSLQLLEQH GLGGLIAAAG GRNAAAPAPL 180
  181 PPPPVAGGKG GKEPSPRTNP VVNRPPEKRQ RVPSAYNRFI KDEIQRIKAG NPDISHREAF 240
  241 SAAAKNWAHF PHIHFGLMPD HQGLRKTSLL PQDHQRKDGH GLLKEGLYAA NMGIAPY

Type	Start	End	Confidence
Signal Peptide	1	18	0.94
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	297	0.99